Kantipur Engineering College has Three departments:

1. Department of Science & Humanities
Department Chief : Mr. Maha Datta Paudel (M.Sc. in Physics)
Deputy HOD : Mr. Tek Narayan Adhikari (M.S. Computer Science)

2. Department of Civil Engineering
Department Chief : Dr. Khada Nanda Dulal
Deputy HOD : Er. Mukesh Khadka (B.E. Civil-Engineering)

3. Department of Computer & Electronics Engineering
Department Chief  :  Er. Subash K.C. (MS in Information & Communication Engineering)
Deputy HOD :  Er. Bhupesh Kumar Mishra (B.E. Computer-Engineering)