Kantipur Engineering College has Three departments:

1. Department of Science & Humanities
Department Chief : Mr. Maha Datta Paudel (M.Sc. in Physics)

2. Department of Civil Engineering
Department Chief : Prof. Dr. Shanti Nath Shrestha (PhD in Irrigation Engineering)
Assistant HOD : Er. Mukesh Khadka (B.E. Civil-Engineering)

3. Department of Computer & Electronics Engineering
Department Chief  :  Er. Subash K.C. (MS in Information & Communication Engineering)
Deputy Department Chief  :  Er. Rajan Kadel (Master of Science with Major in Electrical Engineering)
Assistant HOD :  Er. Bhupesh Kumar Mishra (B.E. Computer-Engineering)